yydG [2017-06-25 11:40:27]

radical SAM epimerase, modification of YydF

Locus: BSU40170

Isoelectric point: 5.86

Molecular weight: 37.06 kDa

Protein length: 319 aa

Gene length: 957 bp

Function: control of LiaR-LiaS activity

Product: radical SAM epimerase

Essential: no

Synonyms

Genomic Context

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Categories containing this gene/protein

• Metabolism → Additional metabolic pathways → Miscellaneous metabolic pathways → Biosynthesis of antibacterial compounds
• Information processing → Protein synthesis, modification and degradation → Protein modification → Protein modification/ other
• Information processing → Regulation of gene expression → Transcription factors and their control → Control of two-component response regulators → Control of response regulators/ other
• Lifestyles → Coping with stress → Biosynthesis of antibacterial compounds

Gene

Coordinates: 4,126,481 → 4,127,440

Expression and Regulation

Operons

• Genes: yydF-yydG-yydH-yydI-yydJ
  Description: PubMed

  Sigma factors

  • SigA: sigma factor, PubMed, in SigA regulon

  Regulatory mechanism

  • AbrB: repression, PubMed, in AbrB regulon
  • Rok: repression, PubMed, in Rok regulon

  Regulation

  • activated after transition to stationary phase(AbrB) PubMed

Biological materials

Mutant

• MGNA-B810 (yydG::erm), available at the NBRP B. subtilis, Japan

References

Reviews

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Original publications

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